Publication

Journal Papers

Characterize transcription factor binding in a shared space. Yuan H, Kshirsagar M, Leslie CS. in preparation 2018

Topic model for infering transcription factor binding jointly from SELEX-seq and ATAC-seq. Kshirsagar M, Yuan H, Leslie CS. in preparation 2018

Characterization of global BRD binding pattern. Schaefer U, Yuan H, Leslie CS, Tarakhovsky A. in preparation 2018

Stage-specific human induced pluripotent stem cells map the progression of meyloid transformation to transplantable leukemia. Kotini AG, Chang CJ, Chow A, Yuan H, et al. Cell Stem Cell 2017

Multitask learning improves prediction of cancer drug sensitivity. Yuan H, Paskov I, Paskov H, Gonzalez AJ, Leslie CS. Scientific Reports 2016

Investigation of maternal genotype effects in autism by genome-wide association. Yuan H, Dougherty JD. Autism Research 2014

Translational profiling of hypocretin neurons identifies candidate molecules for sleep regulation. Dalal J, Roh JH, Shah S, Yuan H, et al. Gene & Development 2013

Conference Presentations

Kshirsagar M, Yuan H*, Leslie CS. Topic model for inferring transcription factor binding profiles jointly from SELEX-seq and ATAC-seq. CSHL New York Quantitative Biology Meeting, August 2017. (*Oral presenter).

Yuan H*, Paskov I, Paskov H, González AJ, Leslie CS. Multitask learning improves prediction of cancer drug sensitivity, NYAS Machine Learning Symposium, March 2016 (*Oral presenter)

Paskov I, Yuan H*, Paskov H, González AJ, Leslie CS. Joint learning over drugs improves prediction of cancer drug response, RECOMB/ISCB Conference on Regulatory and Systems Genomics, Abstract and Oral Presentation, 2014. (*Oral presenter)

Dougherty JD, Yuan H, Constantino JN. Testing the Molecular Genetic Basis of Transmission of Autism Risk by Healthy Mothers, the International Meeting for Autism Research, Donostia, Spain, 2013.